This patch documents continued implementation of the PKI Deployment Framework based upon the revised filesystem layout documented here:
This patch addresses the following issues:
It has been tested and proven to work successfully on a 64-bit Fedora 17 machine (using the appropriate 'tomcatjss.jar').

P. S. -- Ade, as you are the most probable reviewer of this patch, please feel free to 'push' it to 'master' if you find it in order.